PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_33926
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 203aa    MW: 21588.3 Da    PI: 8.9775
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_33926genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.5e-202676155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++++GVr ++ +gr++AeIrdp   gk++r++lg+f++aeeAa+a++ a+++l+g
  PEQU_33926 26 TRFRGVRKRP-WGRFAAEIRDP---GKKTRVWLGTFDSAEEAARAYDTAARALRG 76
                589*******.**********8...557*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.55E-312683No hitNo description
PfamPF008475.8E-142676IPR001471AP2/ERF domain
SuperFamilySSF541711.77E-212784IPR016177DNA-binding domain
SMARTSM003808.9E-372790IPR001471AP2/ERF domain
PROSITE profilePS5103222.7482784IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-312783IPR001471AP2/ERF domain
PRINTSPR003671.3E-102839IPR001471AP2/ERF domain
PRINTSPR003671.3E-105066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MASRKGRSPA AGLPATAPPL PPGTETRFRG VRKRPWGRFA AEIRDPGKKT RVWLGTFDSA  60
EEAARAYDTA ARALRGPKAK TNFCALPSHA STPVGGSGSV ALPFFHQQLP PPSRPASSSL  120
SSTVESFSGP RISVPSAIYI RPLVRPSPPR VLDDDQDCHS DCGSSSSVVD DGDIASAYRQ  180
PLPFDLNLLP LPDDELQSTA LCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-192883359ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-192883662ATERF1
3gcc_A8e-192883662ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00194DAPTransfer from AT1G50640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943238.18e-63PREDICTED: ethylene-responsive transcription factor 3-like
RefseqXP_010943239.18e-63PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotQ9SXS83e-35ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLW8Q9044e-72W8Q904_9ASPA; EREB1
STRINGGSMUA_Achr4P06170_0015e-48(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51232758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.13e-22erf domain protein 9